A talk I gave at the end of my Nuffield project a few years back. I've been working on scientifically sound blood clotting simulation with a nice 3d visualisation on top.
J, Kamocka MM, Liu X, Chen DZ, Rosen ED, & Alber M (2010). A multiscale model of venous thrombus formation with surface-mediated control of blood coagulation cascade. Biophysical journal, 98 (9), 1723-32 PMID: 20441735
J, Kamocka MM, Liu X, Chen DZ, Rosen ED, & Alber M (2010). A multiscale model of venous thrombus formation with surface-mediated control of blood coagulation cascade. Biophysical journal, 98 (9), 1723-32 PMID: 20441735
(thrombus) that breaks loose and is carried by the blood stream to plug another vessel. Pulmonary embolism Blockage of the main artery of the lung. Aspirin
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
in cytozole PLA2 PL AA COX-1 PGH2 TXA2int TR1 TR2 TR3 TR4 TR5 TR6 TR7 TR8 TR9 TR10 Aspirin PGTF continuous place continuous transition normal arc test arc inhibitory arc Hybrid functional Petri net of platelet activation
acytCOX1 TR5 Model // Place(name, initial_concentration) NodePtr txa2_ext (new Place("TXA2_ext" NodePtr aa (new Place("AA" NodePtr cox1 (new Place("COX1" NodePtr txa2_int (new Place("TXA2_int" // Transition(name, substrate, product, NodePtr tr1 (new Transition("TR1", tr1_e NodePtr tr2 (new Transition("TR2", tr2_e NodePtr tr3 (new Transition("TR3", tr3_e DSL D O M A I N - S P E C I F I C LANGUAGE