Del Ponte Prof. of Plant Pathology Editor in Chief TPP Co-founder OPP Prepared for: Re:produce workshop Session 5: Open data, materials and code 11 Dec 2019
workflowr R package helps researchers organize their analyses in a way that promotes effective project management, reproducibility, collaboration, and sharing of results" https://github.com/jdblischak/workflowr
with organized subdirectories • Mixes code and results with R Markdown Reproducible • Displays the code version used to create each result • Runs each analysis in an isolated R session ◦ Records the session information of each analysis ◦ Sets the same seed for random number generation for each analysis Shareable ◦ Creates a website to present your research results ◦ Documents how to host your website for free via GitHub Pages or GitLab Pages ◦ Creates links to past versions of results https://jdblischak.github.io/workflowr
R project on GitHub... write a Dockerfile, add a badge to your README, and build a Docker image. .. dropped into a free, live, RStudio server.." https://karthik.github.io/holepunch/