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rmarkdown楽しい!:研究の再現性のために/NagoyaR16

Yu Tamura
July 23, 2016

 rmarkdown楽しい!:研究の再現性のために/NagoyaR16

研究の透明性と再現性を確保するために,Rのコードと分析結果をRMarkdownを使ってドキュメンテーションする方法を紹介します。

Yu Tamura

July 23, 2016
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  1. ֓ཁ • ର৅ • RͰॻ͍ͨίʔυ΍ͦͷ݁ՌΛอଘͨ͠ΓγΣΞ͠ ͨΓ͍ͨ͠ํʢ૝ఆ͍ͯ͠Δͷ͸ओʹݚڀ໨తʣ • ಺༰ • Nagoya.R

    #14ͷʮςΩετΤσΟλΛ࢖͓͏ʯͷ্ Ґޓ׵൛ʢhttps://speakerdeck.com/tam07pb915/ nagoyar15ʣ 2
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  3. R Markdown͸Ͳ͏࢖͏ʁ • खॱ1 • File -> New File ->

    R Markdown ·ͨ͸ࠨ্ͷ ΞΠίϯΛΫϦοΫͯ͠R MarkdownΛબ୒ 15
  4. R Markdown͸Ͳ͏࢖͏ʁ • खॱ2 • Document, Presentation, Shiny, From Template

    ͷத͔ΒDocumentΛબ୒ʢεϥΠυ࡞Δͱ͖ ͸Presentationʣ • λΠτϧͱ໊લͷೖྗ • ग़ྗͷબ୒ 16
  5. ࢀߟจݙ લా࿨׮ (2015). ʮRͰυΩϡϝϯτੜ੒Λ͠Α͏ʯ Kandai.R #1 Retrieved from http://kazutan.github.io/KandaiR1/rmd_intro.html#/ લా࿨׮

    (2016).ɹʮR MarkdownʹΑΔεϥΠυੜ੒ʯ SappoRo.R #6 Retrieved from https://kazutan.github.io/SappoRoR6/rmd_slide.html#/ Mizumoto, A., Ikeda, M., & Takeuchi, O. (2016). A comparison of cognitive processing during cloze and multiple-choice reading tests using brain activation. ARELE (Annual Review of English Language Education in Japan), 27, 65–80. Murakami, A. (2016). Modeling systematicity and individuality in nonlinear second language development: The case of English grammatical morphemes. Language Learning. Advance Online Publication. doi:10.1111/lang.12166 ਗ਼ਫ༟࢜ (2016).ɹʮSapporoR#6 ॳ৺ऀηογϣϯʯSappoRo.R #6 Retrieved from http://www.slideshare.net/simizu706/sapporor6 27
  6. rmarkdownָ͍͠ʂ ݚڀͷ࠶ݱੑͷͨΊʹ contact info ాଜ ༞ ໊ݹ԰େֶେֶӃੜ [email protected] http://www.tamurayu.wordpress.com/ 28

    • R Markdown ίʔυͱ݁ՌΛυΩϡϝ ϯςʔγϣϯ • HTML • νʔτγʔτݟΕ͹୭Ͱ ΋Ͱ͖Δ • ࠔͬͨΒάάΕ͹